Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC022211.2-201ENST00000585075 2527 ntBASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 HIST2H2BB-201ENST00000449108 381 ntBASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 AC022616.1-201ENST00000518688 554 ntBASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 AC022217.1-201ENST00000521069 738 ntBASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
SLC52A1Q9NWF4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MAGEA5-201ENST00000446757 942 ntBASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MPRIPP1-201ENST00000452433 1089 ntBASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 AC100850.1-201ENST00000506768 649 ntBASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 RN7SL774P-201ENST00000577467 290 ntBASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 AL023803.2-201ENST00000620080 638 ntBASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SLC52A1Q9NWF4 MTHFR-217ENST00000641820 1569 ntBASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 AL596087.1-201ENST00000400979 1969 ntBASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 AL136309.1-201ENST00000403917 691 ntBASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 AL133466.1-201ENST00000447582 150 ntBASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SLC52A1Q9NWF4 KRT8P4-201ENST00000509735 1454 ntBASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SLC52A1Q9NWF4 DPM3-202ENST00000368399 517 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms