Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 MBLAC2-202ENST00000514906 1936 ntBASIC14.45□□□□□ -0.1
HMG20AQ9NP66 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMG20AQ9NP66 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 RBM17P3-201ENST00000417687 1192 ntBASIC14.44□□□□□ -0.1
HMG20AQ9NP66 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 MIR3652-201ENST00000579335 131 ntBASIC14.44□□□□□ -0.1
HMG20AQ9NP66 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 CICP17-201ENST00000418553 2377 ntBASIC14.44□□□□□ -0.1
HMG20AQ9NP66 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMG20AQ9NP66 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 SNX33P1-201ENST00000592116 1762 ntBASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 BX005266.1-201ENST00000473402 457 ntBASIC14.43□□□□□ -0.1
HMG20AQ9NP66 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms