Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 KRT8P12-202ENST00000472924 1397 ntBASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 KRT18P13-201ENST00000400056 1290 ntBASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC40Q9H9A6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AC138035.3-201ENST00000622706 2791 ntBASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AL645939.2-201ENST00000427340 991 ntBASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 HIST3H2BA-201ENST00000436555 524 ntBASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AC027612.4-201ENST00000605371 583 ntBASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 AL607033.1-201ENST00000623900 1599 ntBASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC40Q9H9A6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC40Q9H9A6 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC40Q9H9A6 AC009090.5-201ENST00000624886 2285 ntBASIC16.03■□□□□ 0.16
LRRC40Q9H9A6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC40Q9H9A6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms