Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 MIR6775-201ENST00000617557 69 ntBASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC23.8■■□□□ 1.4
SCAF1Q9H7N4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 DUXAP7-201ENST00000431038 689 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AL022319.1-201ENST00000458183 1167 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 IGHV3-52-201ENST00000519770 353 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RNA5-8SN1-201ENST00000610460 153 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RNA5-8SN5-202ENST00000612463 153 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RNA5-8SN4-201ENST00000613359 153 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 RNA5-8SN5-201ENST00000619471 153 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AL590396.2-201ENST00000636511 1041 ntBASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SCAF1Q9H7N4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 AC022532.1-201ENST00000624563 1728 ntBASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 SNX29P1-201ENST00000548357 1007 ntBASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 AP000842.3-202ENST00000569238 1080 ntBASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 GRAMD4P3-201ENST00000621665 1669 ntBASIC23.78■■□□□ 1.4
SCAF1Q9H7N4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.77■■□□□ 1.4
SCAF1Q9H7N4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms