Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.34■□□□□ 0.53
SH2D4AQ9H788 AC008741.2-201ENST00000612792 3115 ntBASIC18.34■□□□□ 0.53
SH2D4AQ9H788 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 AC008894.3-201ENST00000624324 3103 ntBASIC18.33■□□□□ 0.53
SH2D4AQ9H788 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.33■□□□□ 0.53
SH2D4AQ9H788 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.33■□□□□ 0.53
SH2D4AQ9H788 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 RPS2P32-201ENST00000439199 892 ntBASIC18.33■□□□□ 0.52
SH2D4AQ9H788 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AC133552.6-201ENST00000613406 534 ntBASIC18.33■□□□□ 0.52
SH2D4AQ9H788 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 AL596087.1-201ENST00000400979 1969 ntBASIC18.33■□□□□ 0.52
SH2D4AQ9H788 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
SH2D4AQ9H788 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 COX11-210ENST00000639671 696 ntBASIC18.32■□□□□ 0.52
SH2D4AQ9H788 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH2D4AQ9H788 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms