Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 SLC25A47P1-201ENST00000531577 414 ntBASIC16.94■□□□□ 0.3
NXF3Q9H4D5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
NXF3Q9H4D5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 ANKRD19P-201ENST00000338192 862 ntBASIC16.93■□□□□ 0.3
NXF3Q9H4D5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AC119751.2-201ENST00000504529 210 ntBASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 MIR6752-201ENST00000618442 71 ntBASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NXF3Q9H4D5 AL391005.1-201ENST00000623953 2435 ntBASIC16.92■□□□□ 0.3
NXF3Q9H4D5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 AC068587.3-201ENST00000526613 355 ntBASIC16.92■□□□□ 0.3
NXF3Q9H4D5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 MIR4259-201ENST00000584466 101 ntBASIC16.92■□□□□ 0.3
NXF3Q9H4D5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NXF3Q9H4D5 PRAL-201ENST00000624952 3286 ntBASIC16.92■□□□□ 0.3
NXF3Q9H4D5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 AL139384.1-201ENST00000612143 3047 ntBASIC16.91■□□□□ 0.3
NXF3Q9H4D5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NXF3Q9H4D5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms