Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BX005266.3-201ENST00000443013 1075 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL022237.1-201ENST00000446663 358 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 ST13P20-201ENST00000447996 1065 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL513542.1-201ENST00000452494 731 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM213-204ENST00000458494 572 ntAPPRIS ALT2 TSL 4 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SETP6-201ENST00000479329 568 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC004815.1-201ENST00000484185 331 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PFN2-213ENST00000494827 793 ntTSL 4 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MORF4L2P1-201ENST00000503761 858 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC106872.8-201ENST00000507651 684 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 FGF7P4-201ENST00000509595 295 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 GAPDHP71-201ENST00000511530 1003 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 IGHV3-19-201ENST00000521488 291 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL163952.1-202ENST00000569625 600 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 EIF4A1P9-201ENST00000576035 1207 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AP001107.9-203ENST00000580881 762 ntTSL 3 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC099777.1-201ENST00000603779 1070 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC025594.3-201ENST00000613068 790 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TNFSF10-201ENST00000241261 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SLC16A1P1-201ENST00000486743 1510 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 DDX6P1-205ENST00000441966 1436 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 MOSPD1-201ENST00000370777 784 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CREM-213ENST00000374734 711 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 FXN-202ENST00000396364 980 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AP000357.1-201ENST00000409926 1165 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 RPL23AP18-201ENST00000416139 468 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ISCA2P1-201ENST00000425548 448 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 MRPS33P4-201ENST00000434892 317 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AL354941.1-201ENST00000438600 464 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC037198.2-201ENST00000478845 733 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 CREM-231ENST00000479070 939 ntTSL 5 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC069528.1-202ENST00000482888 637 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 RN7SL205P-201ENST00000490174 284 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 PANCR-202ENST00000513690 448 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC091982.2-201ENST00000518182 570 ntTSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AP001804.1-201ENST00000526868 919 ntBASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
KRTAP3-3Q9BYR6 AL133457.1-201ENST00000564251 987 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms