Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 TREML5P-201ENST00000421694 576 ntBASIC18.67■□□□□ 0.58
NEK1Q96PY6 AL645939.2-201ENST00000427340 991 ntBASIC18.67■□□□□ 0.58
NEK1Q96PY6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 AC010336.2-201ENST00000564226 506 ntBASIC18.67■□□□□ 0.58
NEK1Q96PY6 AL158211.3-201ENST00000607385 239 ntBASIC18.67■□□□□ 0.58
NEK1Q96PY6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.67■□□□□ 0.58
NEK1Q96PY6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NEK1Q96PY6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.66■□□□□ 0.58
NEK1Q96PY6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 C18orf15-201ENST00000623680 2534 ntBASIC18.66■□□□□ 0.58
NEK1Q96PY6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NEK1Q96PY6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.66■□□□□ 0.58
NEK1Q96PY6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 AC138035.3-201ENST00000622706 2791 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 AL109954.1-202ENST00000564051 2148 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NEK1Q96PY6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 MIR943-201ENST00000401286 94 ntBASIC18.65■□□□□ 0.58
NEK1Q96PY6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.65■□□□□ 0.58
NEK1Q96PY6 RN7SL618P-201ENST00000477850 296 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms