Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 AC023824.1-201ENST00000562945 2975 ntBASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 AC009090.5-201ENST00000624886 2285 ntBASIC14.75□□□□□ -0.05
MS4A4EQ96PG1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AL139400.1-201ENST00000366220 510 ntBASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 HLA-V-204ENST00000476601 1289 ntBASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 MIR6069-201ENST00000620069 79 ntBASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.74□□□□□ -0.05
MS4A4EQ96PG1 FO538757.1-201ENST00000623083 1397 ntBASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 AC004449.1-201ENST00000564240 433 ntBASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 AC015911.4-201ENST00000588022 1070 ntBASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 AP001160.2-201ENST00000596071 487 ntBASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 SPDYE12P-201ENST00000618416 771 ntBASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MS4A4EQ96PG1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms