Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 AP003680.1-201ENST00000598970 3660 ntBASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AC006033.1-201ENST00000440505 426 ntBASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AC006453.4-201ENST00000636949 1252 ntBASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRRC3BQ96PB8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ACTBP8-201ENST00000403258 1108 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AC007969.1-201ENST00000433675 447 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AL591846.1-201ENST00000451736 433 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AC104306.2-201ENST00000451877 341 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ECM1P1-201ENST00000604092 1279 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PRSS30P-206ENST00000641773 873 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 AC006449.5-201ENST00000610658 2098 ntBASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRRC3BQ96PB8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms