Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SNX27Q96L92 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AL133267.1-201ENST00000398220 340 ntBASIC16.96■□□□□ 0.31
SNX27Q96L92 MIR663B-201ENST00000408361 115 ntBASIC16.96■□□□□ 0.31
SNX27Q96L92 FXNP2-201ENST00000411625 547 ntBASIC16.96■□□□□ 0.31
SNX27Q96L92 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.96■□□□□ 0.31
SNX27Q96L92 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AL049840.4-201ENST00000602422 811 ntBASIC16.96■□□□□ 0.31
SNX27Q96L92 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SNX27Q96L92 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.96■□□□□ 0.31
SNX27Q96L92 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNX27Q96L92 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SNX27Q96L92 DOC2GP-204ENST00000639052 2548 ntBASIC16.96■□□□□ 0.3
SNX27Q96L92 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX27Q96L92 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNX27Q96L92 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
SNX27Q96L92 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNX27Q96L92 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SNX27Q96L92 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 AC244093.1-201ENST00000610837 814 ntBASIC16.95■□□□□ 0.3
SNX27Q96L92 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.95■□□□□ 0.3
SNX27Q96L92 AL033527.5-201ENST00000641382 801 ntBASIC16.95■□□□□ 0.3
SNX27Q96L92 AC068418.2-201ENST00000577309 3703 ntBASIC16.95■□□□□ 0.3
SNX27Q96L92 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.95■□□□□ 0.3
SNX27Q96L92 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNX27Q96L92 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNX27Q96L92 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 INTS4P2-202ENST00000614726 2019 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.94■□□□□ 0.3
SNX27Q96L92 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNX27Q96L92 VDAC1P7-201ENST00000462417 847 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNX27Q96L92 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.94■□□□□ 0.3
SNX27Q96L92 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms