Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX11Q96FC9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
DDX11Q96FC9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 RPL37AP1-201ENST00000412502 279 ntBASIC18.78■□□□□ 0.6
DDX11Q96FC9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.78■□□□□ 0.6
DDX11Q96FC9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 AC025048.6-201ENST00000634326 1161 ntBASIC18.78■□□□□ 0.6
DDX11Q96FC9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX11Q96FC9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX11Q96FC9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 SPDYE22P-201ENST00000582158 798 ntBASIC18.77■□□□□ 0.6
DDX11Q96FC9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DDX11Q96FC9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.77■□□□□ 0.6
DDX11Q96FC9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX11Q96FC9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.77■□□□□ 0.59
DDX11Q96FC9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.77■□□□□ 0.59
DDX11Q96FC9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.77■□□□□ 0.59
DDX11Q96FC9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DDX11Q96FC9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
DDX11Q96FC9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
DDX11Q96FC9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.77■□□□□ 0.59
DDX11Q96FC9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 GK-202ENST00000378941 458 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 SPTLC1P1-201ENST00000447199 261 ntBASIC18.76■□□□□ 0.59
DDX11Q96FC9 AC009477.1-201ENST00000452936 217 ntBASIC18.76■□□□□ 0.59
DDX11Q96FC9 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms