Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.7■□□□□ 0.1
ECHDC3Q96DC8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC009090.5-201ENST00000624886 2285 ntBASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC005225.4-201ENST00000557330 545 ntBASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ECHDC3Q96DC8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 COX5BP8-201ENST00000416911 349 ntBASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 GAPDHP40-201ENST00000505218 1006 ntBASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ECHDC3Q96DC8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms