Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 RBM39-205ENST00000397370 612 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 AC236430.1-201ENST00000402231 743 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.8□□□□□ -0.52
RNF183Q96D59 AC244107.1-201ENST00000442033 332 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 UGT1A2P-201ENST00000454886 866 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 AL079307.3-201ENST00000556114 283 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 AL133215.2-201ENST00000609242 977 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 TEX28P1-201ENST00000613479 1221 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 TEX28P2-201ENST00000617764 1221 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.8□□□□□ -0.52
RNF183Q96D59 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 AC087499.5-201ENST00000452760 1342 ntBASIC11.8□□□□□ -0.52
RNF183Q96D59 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RNF183Q96D59 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.8□□□□□ -0.52
RNF183Q96D59 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RNF183Q96D59 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 NORAD-201ENST00000565493 5339 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 GCK-202ENST00000345378 2421 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 AL035633.1-201ENST00000406139 838 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 RPL37AP1-201ENST00000412502 279 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.79□□□□□ -0.52
RNF183Q96D59 COX20P2-201ENST00000452636 358 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 AL139010.1-201ENST00000454878 894 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 AC190387.1-201ENST00000551683 408 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
RNF183Q96D59 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.79□□□□□ -0.52
RNF183Q96D59 LINC02560-201ENST00000596379 459 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 AC009118.2-201ENST00000613275 655 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 AC008761.3-201ENST00000624803 892 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.79□□□□□ -0.52
RNF183Q96D59 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.79□□□□□ -0.52
RNF183Q96D59 RNF216P1-203ENST00000404404 2427 ntBASIC11.79□□□□□ -0.52
RNF183Q96D59 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RNF183Q96D59 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms