Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AL645608.8-201ENST00000606034 2086 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC005052.1-201ENST00000625181 2492 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 RPL17P11-201ENST00000417593 544 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 RN7SL11P-201ENST00000471305 293 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC005740.2-201ENST00000511085 419 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC024681.1-201ENST00000521917 487 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC073413.1-201ENST00000603927 732 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC025181.2-201ENST00000606994 802 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC091544.8-201ENST00000619490 361 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AL023803.2-201ENST00000620080 638 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 AC022748.3-201ENST00000621828 275 ntBASIC15.53■□□□□ 0.08
CLDN23Q96B33 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN23Q96B33 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN23Q96B33 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 AC008132.1-202ENST00000342005 1389 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 DPM3-202ENST00000368399 517 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 MIR648-201ENST00000385046 94 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 POM121L8P-201ENST00000417732 1281 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 POM121L9P-203ENST00000441984 1285 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 CHMP1AP1-201ENST00000445563 662 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 EEF1DP6-201ENST00000449232 372 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 PRKXP1-201ENST00000561423 1122 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CLDN23Q96B33 AP001002.3-201ENST00000623482 206 ntBASIC15.52■□□□□ 0.08
CLDN23Q96B33 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLDN23Q96B33 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.52■□□□□ 0.07
CLDN23Q96B33 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CLDN23Q96B33 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN23Q96B33 KRT8P14-201ENST00000414254 1442 ntBASIC15.51■□□□□ 0.07
CLDN23Q96B33 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
CLDN23Q96B33 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN23Q96B33 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CLDN23Q96B33 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN23Q96B33 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms