Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 AC253576.1-201ENST00000511645 1156 ntBASIC16.08■□□□□ 0.16
PTCD2Q8WV60 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 IGHV3-42-201ENST00000520410 361 ntBASIC16.08■□□□□ 0.16
PTCD2Q8WV60 AC069120.2-201ENST00000524091 540 ntBASIC16.08■□□□□ 0.16
PTCD2Q8WV60 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 LINC02084-201ENST00000606069 1096 ntBASIC16.08■□□□□ 0.16
PTCD2Q8WV60 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 KRT8P37-201ENST00000451609 1420 ntBASIC16.08■□□□□ 0.16
PTCD2Q8WV60 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCD2Q8WV60 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 MIR661-201ENST00000384842 89 ntBASIC16.07■□□□□ 0.16
PTCD2Q8WV60 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AC011467.4-201ENST00000594891 528 ntBASIC16.07■□□□□ 0.16
PTCD2Q8WV60 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AL096865.1-201ENST00000606796 927 ntBASIC16.07■□□□□ 0.16
PTCD2Q8WV60 AL138828.2-201ENST00000615812 383 ntBASIC16.07■□□□□ 0.16
PTCD2Q8WV60 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 CASC19-229ENST00000641418 1373 ntBASIC16.07■□□□□ 0.16
PTCD2Q8WV60 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTCD2Q8WV60 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 FAM8A3P-201ENST00000427218 844 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AC105021.1-202ENST00000570572 669 ntBASIC16.06■□□□□ 0.16
PTCD2Q8WV60 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCD2Q8WV60 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms