Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 TMEM261P1-201ENST00000604899 340 ntBASIC16.93■□□□□ 0.3
BEST2Q8NFU1 MIR8072-201ENST00000614241 80 ntBASIC16.93■□□□□ 0.3
BEST2Q8NFU1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
BEST2Q8NFU1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 LINC02199-201ENST00000506655 2702 ntBASIC16.92■□□□□ 0.3
BEST2Q8NFU1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.92■□□□□ 0.3
BEST2Q8NFU1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.92■□□□□ 0.3
BEST2Q8NFU1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 PCDHA1-201ENST00000378133 2726 ntBASIC16.91■□□□□ 0.3
BEST2Q8NFU1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 GK-202ENST00000378941 458 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 AL133267.1-201ENST00000398220 340 ntBASIC16.91■□□□□ 0.3
BEST2Q8NFU1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 RN7SL752P-201ENST00000463779 287 ntBASIC16.91■□□□□ 0.3
BEST2Q8NFU1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 AC092552.1-201ENST00000547243 906 ntBASIC16.91■□□□□ 0.3
BEST2Q8NFU1 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 CTBP2P3-201ENST00000585629 1255 ntBASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST2Q8NFU1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.9■□□□□ 0.3
BEST2Q8NFU1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BEST2Q8NFU1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms