Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 PPT1-215ENST00000641471 2368 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AL645939.2-201ENST00000427340 991 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 RN7SL618P-201ENST00000477850 296 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 GPALPP1-207ENST00000611650 899 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AC009090.5-201ENST00000624886 2285 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AC063926.3-201ENST00000624734 5658 ntBASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35BQ8NCS4 FLJ16779-201ENST00000612722 7638 ntBASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 Z97205.2-201ENST00000564697 1639 ntBASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 AC104640.1-201ENST00000562617 2109 ntBASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 AC025048.3-201ENST00000590609 569 ntBASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 AC005702.4-201ENST00000618393 416 ntBASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35BQ8NCS4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.71■□□□□ 0.26
TMEM35BQ8NCS4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM35BQ8NCS4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM35BQ8NCS4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM35BQ8NCS4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM35BQ8NCS4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35BQ8NCS4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms