Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AC105917.1-201ENST00000506637 2539 ntBASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 CICP4-201ENST00000447359 2812 ntBASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf42Q8N5U0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 HAUS4P1-201ENST00000406739 1145 ntBASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 KLF2P3-201ENST00000451977 1087 ntBASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AL139010.1-201ENST00000454878 894 ntBASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC140878.1-201ENST00000565277 250 ntBASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AL603832.2-201ENST00000566195 2125 ntBASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
C11orf42Q8N5U0 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 AL513523.2-202ENST00000427283 2040 ntBASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
C11orf42Q8N5U0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms