Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC116Q8IYX3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 TUBB3P1-201ENST00000405796 1332 ntBASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 FO393414.2-201ENST00000405153 598 ntBASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SSR1P1-201ENST00000407630 814 ntBASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 AC097359.3-201ENST00000603982 1210 ntBASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 CETN4P-206ENST00000642099 2168 ntBASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC116Q8IYX3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 AC087481.3-201ENST00000602886 1894 ntBASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 AC090616.6-203ENST00000579186 1945 ntBASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 AC009090.5-201ENST00000624886 2285 ntBASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC116Q8IYX3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms