Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 AC105250.1-201ENST00000509378 2057 ntBASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SCUBE3Q8IX30 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 SPDYE18-201ENST00000510091 1050 ntBASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SCUBE3Q8IX30 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SCUBE3Q8IX30 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 TSPY16P-201ENST00000449843 468 ntBASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 AC127383.1-201ENST00000444697 1800 ntBASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.58■□□□□ 0.24
SCUBE3Q8IX30 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms