Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 HTR5BP-201ENST00000430851 1154 ntBASIC14.13□□□□□ -0.15
LRRC28Q86X40 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 AC055717.3-201ENST00000622967 595 ntBASIC14.13□□□□□ -0.15
LRRC28Q86X40 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRC28Q86X40 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.13□□□□□ -0.15
LRRC28Q86X40 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC012569.1-201ENST00000591191 1524 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC091951.1-201ENST00000512854 2465 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 HCG4-201ENST00000418983 998 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 YBX1P5-201ENST00000509441 847 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC068137.2-201ENST00000605408 478 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC112693.3-201ENST00000624819 1983 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 MROH4P-201ENST00000431302 1578 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRC28Q86X40 AC139749.1-202ENST00000617529 3139 ntBASIC14.12□□□□□ -0.15
LRRC28Q86X40 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRC28Q86X40 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRC28Q86X40 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
LRRC28Q86X40 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms