Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 MIR1227-201ENST00000408484 88 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 MIR4683-201ENST00000579659 81 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC132192.2-201ENST00000596206 1147 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 MEG3_2.1-201ENST00000611456 105 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC004923.1-202ENST00000642106 209 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AP001582.1-201ENST00000525856 295 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 AC009093.2-202ENST00000620513 2079 ntBASIC10.76□□□□□ -0.69
CSMD3Q7Z407 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CSMD3Q7Z407 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 MPV17-205ENST00000402310 906 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ATP6V0CP2-201ENST00000469409 207 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AC125604.1-201ENST00000496255 707 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AL359258.3-201ENST00000622910 2331 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 Z97180.1-201ENST00000445173 988 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PHKG1P2-201ENST00000457537 863 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 COX6A1P2-201ENST00000620597 330 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms