Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SNHG9-202ENST00000564014 471 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AC003101.2-201ENST00000612557 442 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AL691403.2-201ENST00000618460 490 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AC139530.3-201ENST00000620344 690 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 LINC00628-201ENST00000628516 1289 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 CICP13-201ENST00000422015 2789 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.23□□□□□ -0.13
NHLRC1Q6VVB1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AL035456.1-201ENST00000456064 1369 ntBASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 KRT8P12-202ENST00000472924 1397 ntBASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NHLRC1Q6VVB1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PPT1-215ENST00000641471 2368 ntBASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 FO393414.2-201ENST00000405153 598 ntBASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AZGP1P1-201ENST00000411909 902 ntBASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms