Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC026120.1-201ENST00000611536 926 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC105250.1-201ENST00000509378 2057 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC023157.3-201ENST00000619086 2088 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.18■□□□□ 0.18
CASC4Q6P4E1 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CASC4Q6P4E1 AC090616.6-203ENST00000579186 1945 ntBASIC16.17■□□□□ 0.18
CASC4Q6P4E1 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 YBX2P1-201ENST00000394192 760 ntBASIC16.17■□□□□ 0.18
CASC4Q6P4E1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 AC243562.1-201ENST00000560672 389 ntBASIC16.17■□□□□ 0.18
CASC4Q6P4E1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 UXT-AS1-201ENST00000590504 1525 ntBASIC16.17■□□□□ 0.18
CASC4Q6P4E1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CASC4Q6P4E1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 HLA-H-201ENST00000383620 1096 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC004987.2-201ENST00000395959 1148 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 SPCS2P4-201ENST00000436160 681 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC079140.1-201ENST00000508039 487 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 KRT8P48-201ENST00000515599 1220 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AP000842.3-202ENST00000569238 1080 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 AC138035.3-201ENST00000622706 2791 ntBASIC16.16■□□□□ 0.18
CASC4Q6P4E1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CASC4Q6P4E1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms