Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AL645939.2-201ENST00000427340 991 ntBASIC18.87■□□□□ 0.61
RNF20Q5VTR2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC013268.4-201ENST00000637413 2228 ntBASIC18.87■□□□□ 0.61
RNF20Q5VTR2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF20Q5VTR2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.86■□□□□ 0.61
RNF20Q5VTR2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF20Q5VTR2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.85■□□□□ 0.61
RNF20Q5VTR2 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 AL139400.1-201ENST00000366220 510 ntBASIC18.85■□□□□ 0.61
RNF20Q5VTR2 AL080243.2-201ENST00000418783 582 ntBASIC18.85■□□□□ 0.61
RNF20Q5VTR2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 AC004449.1-201ENST00000564240 433 ntBASIC18.85■□□□□ 0.61
RNF20Q5VTR2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF20Q5VTR2 Z92544.3-201ENST00000624747 417 ntBASIC18.85■□□□□ 0.61
RNF20Q5VTR2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms