Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 KRT43P-201ENST00000434019 910 ntBASIC16.67■□□□□ 0.26
VARS2Q5ST30 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AC119751.2-201ENST00000504529 210 ntBASIC16.67■□□□□ 0.26
VARS2Q5ST30 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 SNX29P1-201ENST00000548357 1007 ntBASIC16.67■□□□□ 0.26
VARS2Q5ST30 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 MIR4259-201ENST00000584466 101 ntBASIC16.67■□□□□ 0.26
VARS2Q5ST30 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AL033527.4-201ENST00000641026 673 ntBASIC16.67■□□□□ 0.26
VARS2Q5ST30 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.67■□□□□ 0.26
VARS2Q5ST30 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VARS2Q5ST30 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC02447-202ENST00000501888 2146 ntBASIC16.66■□□□□ 0.26
VARS2Q5ST30 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 AL133267.1-201ENST00000398220 340 ntBASIC16.66■□□□□ 0.26
VARS2Q5ST30 BOLA2P3-201ENST00000404566 256 ntBASIC16.66■□□□□ 0.26
VARS2Q5ST30 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 MIR6775-201ENST00000617557 69 ntBASIC16.66■□□□□ 0.26
VARS2Q5ST30 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.66■□□□□ 0.26
VARS2Q5ST30 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
VARS2Q5ST30 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VARS2Q5ST30 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VARS2Q5ST30 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.65■□□□□ 0.26
VARS2Q5ST30 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms