Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.61■□□□□ 0.89
COL16A1Q07092 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.61■□□□□ 0.89
COL16A1Q07092 BCAS2P2-201ENST00000425064 674 ntBASIC20.61■□□□□ 0.89
COL16A1Q07092 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.61■□□□□ 0.89
COL16A1Q07092 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AC005962.1-201ENST00000584100 773 ntBASIC20.61■□□□□ 0.89
COL16A1Q07092 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AC138466.5-201ENST00000624002 808 ntBASIC20.61■□□□□ 0.89
COL16A1Q07092 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.61■□□□□ 0.89
COL16A1Q07092 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.61■□□□□ 0.89
COL16A1Q07092 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COL16A1Q07092 AC009093.2-202ENST00000620513 2079 ntBASIC20.61■□□□□ 0.89
COL16A1Q07092 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COL16A1Q07092 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL16A1Q07092 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 FRMPD2B-201ENST00000431305 1347 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 AL583805.1-201ENST00000391389 531 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 HLA-K-203ENST00000430151 1046 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 PFN2-205ENST00000461868 613 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 ORAOV1P1-201ENST00000503108 395 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 MRPL22P1-201ENST00000505398 616 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.6■□□□□ 0.89
COL16A1Q07092 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.6■□□□□ 0.89
COL16A1Q07092 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 AC073592.2-201ENST00000623062 780 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.6■□□□□ 0.89
COL16A1Q07092 LINC00431-202ENST00000636375 159 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.6■□□□□ 0.89
COL16A1Q07092 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 MRPL37P1-201ENST00000592451 1337 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 AC024293.1-201ENST00000467930 498 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COL16A1Q07092 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC20.6■□□□□ 0.89
COL16A1Q07092 RN7SL81P-201ENST00000493781 261 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 AC008723.1-201ENST00000506922 207 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 FAM86KP-201ENST00000509817 987 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC20.6■□□□□ 0.89
COL16A1Q07092 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.6■□□□□ 0.89
COL16A1Q07092 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 MIR4313-201ENST00000580760 101 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.6■□□□□ 0.89
COL16A1Q07092 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.6■□□□□ 0.89
COL16A1Q07092 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COL16A1Q07092 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
COL16A1Q07092 AC092299.1-201ENST00000632679 757 ntBASIC20.6■□□□□ 0.89
COL16A1Q07092 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL16A1Q07092 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC20.59■□□□□ 0.89
COL16A1Q07092 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC20.59■□□□□ 0.89
COL16A1Q07092 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.59■□□□□ 0.89
COL16A1Q07092 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
COL16A1Q07092 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL16A1Q07092 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL16A1Q07092 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.59■□□□□ 0.89
COL16A1Q07092 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL16A1Q07092 HIST2H2BA-201ENST00000412169 381 ntBASIC20.58■□□□□ 0.89
COL16A1Q07092 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC20.58■□□□□ 0.89
COL16A1Q07092 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 LINC00634-202ENST00000505157 222 ntBASIC20.58■□□□□ 0.89
COL16A1Q07092 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC20.58■□□□□ 0.89
COL16A1Q07092 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.58■□□□□ 0.89
COL16A1Q07092 NUDT4P2-201ENST00000578341 546 ntBASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms