Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.46□□□□□ -0.09
LTBQ06643 AC138649.4-201ENST00000612222 287 ntBASIC14.46□□□□□ -0.09
LTBQ06643 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTBQ06643 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTBQ06643 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.46□□□□□ -0.09
LTBQ06643 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LTBQ06643 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LTBQ06643 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
LTBQ06643 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.46□□□□□ -0.1
LTBQ06643 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTBQ06643 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.46□□□□□ -0.1
LTBQ06643 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LTBQ06643 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBQ06643 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBQ06643 AC004987.2-201ENST00000395959 1148 ntBASIC14.45□□□□□ -0.1
LTBQ06643 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 GPS2P2-201ENST00000430745 888 ntBASIC14.45□□□□□ -0.1
LTBQ06643 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.45□□□□□ -0.1
LTBQ06643 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBQ06643 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.45□□□□□ -0.1
LTBQ06643 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 AP005018.1-201ENST00000525475 301 ntBASIC14.45□□□□□ -0.1
LTBQ06643 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.45□□□□□ -0.1
LTBQ06643 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
LTBQ06643 CYP4F24P-201ENST00000586049 1580 ntBASIC14.45□□□□□ -0.1
LTBQ06643 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 AL358472.5-202ENST00000641448 1267 ntBASIC14.45□□□□□ -0.1
LTBQ06643 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LTBQ06643 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.45□□□□□ -0.1
LTBQ06643 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTBQ06643 AC073347.1-201ENST00000421633 2643 ntBASIC14.45□□□□□ -0.1
LTBQ06643 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.44□□□□□ -0.1
LTBQ06643 REXO1L1P-202ENST00000608646 1974 ntBASIC14.44□□□□□ -0.1
LTBQ06643 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.44□□□□□ -0.1
LTBQ06643 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LTBQ06643 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 MIR661-201ENST00000384842 89 ntBASIC14.44□□□□□ -0.1
LTBQ06643 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LTBQ06643 AL627223.1-201ENST00000416693 442 ntBASIC14.44□□□□□ -0.1
LTBQ06643 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.44□□□□□ -0.1
LTBQ06643 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.44□□□□□ -0.1
LTBQ06643 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.44□□□□□ -0.1
LTBQ06643 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.44□□□□□ -0.1
LTBQ06643 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.44□□□□□ -0.1
LTBQ06643 MIR4313-201ENST00000580760 101 ntBASIC14.44□□□□□ -0.1
LTBQ06643 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTBQ06643 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms