Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PHC1P78364 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.11■□□□□ 0.01
PHC1P78364 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PHC1P78364 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.11■□□□□ 0.01
PHC1P78364 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PHC1P78364 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PHC1P78364 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
PHC1P78364 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 CICP14-201ENST00000629111 2732 ntBASIC15.1■□□□□ 0.01
PHC1P78364 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PHC1P78364 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 SNX18-202ENST00000343017 3140 ntBASIC15.1■□□□□ 0.01
PHC1P78364 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PHC1P78364 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PHC1P78364 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 FAM58CP-201ENST00000435741 640 ntBASIC15.1■□□□□ 0.01
PHC1P78364 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.1■□□□□ 0.01
PHC1P78364 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 KRT8P48-201ENST00000515599 1220 ntBASIC15.1■□□□□ 0.01
PHC1P78364 AP000842.3-202ENST00000569238 1080 ntBASIC15.1■□□□□ 0.01
PHC1P78364 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PHC1P78364 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.1■□□□□ 0.01
PHC1P78364 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PHC1P78364 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 SPCS2P4-201ENST00000436160 681 ntBASIC15.09■□□□□ 0.01
PHC1P78364 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.09■□□□□ 0.01
PHC1P78364 RNA5SP410-201ENST00000516285 106 ntBASIC15.09■□□□□ 0.01
PHC1P78364 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.09■□□□□ 0.01
PHC1P78364 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 CYP4F24P-201ENST00000586049 1580 ntBASIC15.09■□□□□ 0.01
PHC1P78364 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PHC1P78364 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PHC1P78364 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PHC1P78364 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms