Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SEC61A1P61619 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SEC61A1P61619 AL512652.2-201ENST00000625156 1716 ntBASIC13.93□□□□□ -0.18
SEC61A1P61619 KRT18P28-201ENST00000453838 1332 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.92□□□□□ -0.18
SEC61A1P61619 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 AC097376.2-205ENST00000610159 5334 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 RNU1-129P-201ENST00000384064 167 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.92□□□□□ -0.18
SEC61A1P61619 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 AL109954.1-202ENST00000564051 2148 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 U1.21-201ENST00000580816 167 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 CYP2A7P1-201ENST00000595391 815 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 AL031055.1-201ENST00000606362 631 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 CDC14C-201ENST00000428251 1719 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 AL031731.1-201ENST00000642131 2094 ntBASIC13.92□□□□□ -0.18
SEC61A1P61619 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SEC61A1P61619 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SEC61A1P61619 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.92□□□□□ -0.18
SEC61A1P61619 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.91□□□□□ -0.18
SEC61A1P61619 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 LINC02447-202ENST00000501888 2146 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 KRT8P39-201ENST00000396270 1433 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 POU5F1P6-201ENST00000466990 990 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AL135744.1-201ENST00000565098 629 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.91□□□□□ -0.18
SEC61A1P61619 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.91□□□□□ -0.18
SEC61A1P61619 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 AC026120.1-201ENST00000611536 926 ntBASIC13.91□□□□□ -0.18
SEC61A1P61619 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61A1P61619 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.91□□□□□ -0.18
SEC61A1P61619 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SEC61A1P61619 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SEC61A1P61619 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.91□□□□□ -0.18
SEC61A1P61619 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.91□□□□□ -0.18
SEC61A1P61619 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms