Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.75□□□□□ -0.53
CMC4P56277 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CMC4P56277 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CMC4P56277 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.75□□□□□ -0.53
CMC4P56277 FAM8A3P-201ENST00000427218 844 ntBASIC11.75□□□□□ -0.53
CMC4P56277 AL353779.1-201ENST00000434793 351 ntBASIC11.75□□□□□ -0.53
CMC4P56277 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.75□□□□□ -0.53
CMC4P56277 RPL13AP25-201ENST00000484130 612 ntBASIC11.75□□□□□ -0.53
CMC4P56277 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.75□□□□□ -0.53
CMC4P56277 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.75□□□□□ -0.53
CMC4P56277 AC009407.1-201ENST00000568958 598 ntBASIC11.75□□□□□ -0.53
CMC4P56277 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 AC097359.3-201ENST00000603982 1210 ntBASIC11.75□□□□□ -0.53
CMC4P56277 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.75□□□□□ -0.53
CMC4P56277 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.75□□□□□ -0.53
CMC4P56277 AC004461.2-201ENST00000629517 803 ntBASIC11.75□□□□□ -0.53
CMC4P56277 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.75□□□□□ -0.53
CMC4P56277 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.75□□□□□ -0.53
CMC4P56277 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CMC4P56277 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CMC4P56277 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 AL662844.4-201ENST00000606367 2838 ntBASIC11.74□□□□□ -0.53
CMC4P56277 PGR-209ENST00000617858 2816 ntTSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CMC4P56277 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.74□□□□□ -0.53
CMC4P56277 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 BCRP1-201ENST00000444246 691 ntBASIC11.74□□□□□ -0.53
CMC4P56277 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC11.74□□□□□ -0.53
CMC4P56277 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 DOC2GP-202ENST00000514950 1163 ntBASIC11.74□□□□□ -0.53
CMC4P56277 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 RAB35-202ENST00000534951 939 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.74□□□□□ -0.53
CMC4P56277 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms