Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.4■□□□□ 0.38
LBX1P52954 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LBX1P52954 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.4■□□□□ 0.38
LBX1P52954 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LBX1P52954 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
LBX1P52954 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.4■□□□□ 0.38
LBX1P52954 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LBX1P52954 ZNF436-AS1-201ENST00000335648 2547 ntBASIC17.4■□□□□ 0.38
LBX1P52954 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.39■□□□□ 0.38
LBX1P52954 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.39■□□□□ 0.38
LBX1P52954 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.39■□□□□ 0.38
LBX1P52954 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LBX1P52954 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17.39■□□□□ 0.37
LBX1P52954 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 AP005212.2-201ENST00000584979 510 ntBASIC17.39■□□□□ 0.37
LBX1P52954 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 AL358472.3-201ENST00000608147 415 ntBASIC17.39■□□□□ 0.37
LBX1P52954 AC084781.1-201ENST00000613737 656 ntBASIC17.39■□□□□ 0.37
LBX1P52954 LINC01783-202ENST00000614408 828 ntBASIC17.39■□□□□ 0.37
LBX1P52954 BX284668.2-205ENST00000619677 828 ntBASIC17.39■□□□□ 0.37
LBX1P52954 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LBX1P52954 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.39■□□□□ 0.37
LBX1P52954 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.39■□□□□ 0.37
LBX1P52954 KRT8P14-201ENST00000414254 1442 ntBASIC17.38■□□□□ 0.37
LBX1P52954 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.38■□□□□ 0.37
LBX1P52954 AL592424.1-201ENST00000563624 1536 ntBASIC17.38■□□□□ 0.37
LBX1P52954 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LBX1P52954 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LBX1P52954 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.38■□□□□ 0.37
LBX1P52954 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.38■□□□□ 0.37
LBX1P52954 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.38■□□□□ 0.37
LBX1P52954 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.38■□□□□ 0.37
LBX1P52954 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.38■□□□□ 0.37
LBX1P52954 SIGLEC18P-201ENST00000602271 909 ntBASIC17.38■□□□□ 0.37
LBX1P52954 AC138466.3-201ENST00000619983 221 ntBASIC17.38■□□□□ 0.37
LBX1P52954 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 AC073130.3-201ENST00000624389 2278 ntBASIC17.38■□□□□ 0.37
LBX1P52954 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.38■□□□□ 0.37
LBX1P52954 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LBX1P52954 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LBX1P52954 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LBX1P52954 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LBX1P52954 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LBX1P52954 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LBX1P52954 AL354861.1-201ENST00000445213 355 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms