Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.04□□□□□ -0.16
LHX2P50458 AC133539.2-201ENST00000604757 467 ntBASIC14.04□□□□□ -0.16
LHX2P50458 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.04□□□□□ -0.16
LHX2P50458 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LHX2P50458 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LHX2P50458 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.04□□□□□ -0.16
LHX2P50458 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 AC134915.1-201ENST00000426461 574 ntBASIC14.03□□□□□ -0.16
LHX2P50458 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 GIMAP3P-201ENST00000495150 836 ntBASIC14.03□□□□□ -0.16
LHX2P50458 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.03□□□□□ -0.16
LHX2P50458 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.03□□□□□ -0.16
LHX2P50458 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.03□□□□□ -0.16
LHX2P50458 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.03□□□□□ -0.16
LHX2P50458 AP005117.1-202ENST00000581724 1908 ntBASIC14.03□□□□□ -0.16
LHX2P50458 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LHX2P50458 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LHX2P50458 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX2P50458 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX2P50458 AL596257.1-201ENST00000641463 2694 ntBASIC14.02□□□□□ -0.16
LHX2P50458 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX2P50458 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX2P50458 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX2P50458 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.02□□□□□ -0.16
LHX2P50458 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX2P50458 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LHX2P50458 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.02□□□□□ -0.16
LHX2P50458 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
LHX2P50458 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.02□□□□□ -0.17
LHX2P50458 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LHX2P50458 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 AC124283.3-201ENST00000570869 594 ntBASIC14.02□□□□□ -0.17
LHX2P50458 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX2P50458 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
LHX2P50458 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX2P50458 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX2P50458 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX2P50458 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.02□□□□□ -0.17
LHX2P50458 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms