Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
SRP9P49458 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SRP9P49458 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SRP9P49458 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 GPAA1P2-202ENST00000606848 1787 ntBASIC14.09□□□□□ -0.15
SRP9P49458 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 WASH6P-202ENST00000359512 1437 ntBASIC14.09□□□□□ -0.15
SRP9P49458 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.09□□□□□ -0.15
SRP9P49458 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.09□□□□□ -0.15
SRP9P49458 UPF3AP3-201ENST00000420996 769 ntBASIC14.09□□□□□ -0.15
SRP9P49458 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.09□□□□□ -0.15
SRP9P49458 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SRP9P49458 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 RARRES2P8-201ENST00000566335 367 ntBASIC14.09□□□□□ -0.15
SRP9P49458 AC010327.4-202ENST00000591484 748 ntBASIC14.09□□□□□ -0.15
SRP9P49458 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
SRP9P49458 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SRP9P49458 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SRP9P49458 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SRP9P49458 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.08□□□□□ -0.15
SRP9P49458 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SRP9P49458 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SRP9P49458 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRP9P49458 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
SRP9P49458 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SRP9P49458 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SRP9P49458 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms