Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.41□□□□□ -0.1
CENPAP49450 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.41□□□□□ -0.1
CENPAP49450 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 AC002347.1-201ENST00000569543 541 ntBASIC14.41□□□□□ -0.1
CENPAP49450 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.41□□□□□ -0.1
CENPAP49450 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 PEG13-201ENST00000631594 5667 ntBASIC14.41□□□□□ -0.1
CENPAP49450 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CENPAP49450 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.41□□□□□ -0.1
CENPAP49450 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CENPAP49450 AL589702.1-201ENST00000641229 1509 ntBASIC14.41□□□□□ -0.1
CENPAP49450 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CENPAP49450 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CENPAP49450 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 KRT18P3-201ENST00000451602 1288 ntBASIC14.4□□□□□ -0.1
CENPAP49450 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.4□□□□□ -0.1
CENPAP49450 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 PDPK2P-202ENST00000562415 1191 ntBASIC14.4□□□□□ -0.1
CENPAP49450 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 AC140113.2-201ENST00000604370 208 ntBASIC14.4□□□□□ -0.1
CENPAP49450 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 AC027601.4-201ENST00000611259 610 ntBASIC14.4□□□□□ -0.1
CENPAP49450 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.4□□□□□ -0.1
CENPAP49450 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CENPAP49450 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CENPAP49450 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms