Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 MIR1909-201ENST00000411312 80 ntBASIC18.37■□□□□ 0.53
CDK8P49336 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.37■□□□□ 0.53
CDK8P49336 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.37■□□□□ 0.53
CDK8P49336 AC093433.1-201ENST00000458048 571 ntBASIC18.37■□□□□ 0.53
CDK8P49336 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.37■□□□□ 0.53
CDK8P49336 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 SNX29P1-201ENST00000548357 1007 ntBASIC18.37■□□□□ 0.53
CDK8P49336 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.37■□□□□ 0.53
CDK8P49336 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 AC127383.1-201ENST00000444697 1800 ntBASIC18.37■□□□□ 0.53
CDK8P49336 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.37■□□□□ 0.53
CDK8P49336 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CDK8P49336 DOC2GP-204ENST00000639052 2548 ntBASIC18.37■□□□□ 0.53
CDK8P49336 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.36■□□□□ 0.53
CDK8P49336 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 AP001889.1-201ENST00000525414 633 ntBASIC18.36■□□□□ 0.53
CDK8P49336 AC068587.3-201ENST00000526613 355 ntBASIC18.36■□□□□ 0.53
CDK8P49336 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 PTP4A1P2-201ENST00000546033 454 ntBASIC18.36■□□□□ 0.53
CDK8P49336 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 AC092127.1-201ENST00000567093 3455 ntBASIC18.36■□□□□ 0.53
CDK8P49336 AP001063.1-201ENST00000568332 529 ntBASIC18.36■□□□□ 0.53
CDK8P49336 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.36■□□□□ 0.53
CDK8P49336 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDK8P49336 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDK8P49336 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDK8P49336 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK8P49336 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK8P49336 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK8P49336 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDK8P49336 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.35■□□□□ 0.53
CDK8P49336 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDK8P49336 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDK8P49336 MIR658-201ENST00000385210 100 ntBASIC18.35■□□□□ 0.53
CDK8P49336 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.35■□□□□ 0.53
CDK8P49336 AC119751.2-201ENST00000504529 210 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms