Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 RPL7P35-201ENST00000446943 740 ntBASIC14.24□□□□□ -0.13
ATRXP46100 AL353637.1-201ENST00000451571 732 ntBASIC14.24□□□□□ -0.13
ATRXP46100 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
ATRXP46100 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.24□□□□□ -0.13
ATRXP46100 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ATRXP46100 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 RNA5SP486-201ENST00000515961 83 ntBASIC14.23□□□□□ -0.13
ATRXP46100 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.23□□□□□ -0.13
ATRXP46100 AL031713.1-201ENST00000564813 661 ntBASIC14.23□□□□□ -0.13
ATRXP46100 AC242376.2-201ENST00000619355 883 ntBASIC14.23□□□□□ -0.13
ATRXP46100 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 HYMAI-201ENST00000635591 3347 ntBASIC14.23□□□□□ -0.13
ATRXP46100 AC067852.2-201ENST00000590513 2313 ntBASIC14.23□□□□□ -0.13
ATRXP46100 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 REXO1L1P-202ENST00000608646 1974 ntBASIC14.23□□□□□ -0.13
ATRXP46100 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.23□□□□□ -0.13
ATRXP46100 CHCHD2P2-201ENST00000503744 321 ntBASIC14.23□□□□□ -0.13
ATRXP46100 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
ATRXP46100 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 AC022748.3-201ENST00000621828 275 ntBASIC14.23□□□□□ -0.13
ATRXP46100 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 NEFHP1-201ENST00000412845 2629 ntBASIC14.23□□□□□ -0.13
ATRXP46100 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.23□□□□□ -0.13
ATRXP46100 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
ATRXP46100 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
ATRXP46100 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
ATRXP46100 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ATRXP46100 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATRXP46100 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ATRXP46100 AC013355.1-201ENST00000562625 723 ntBASIC14.22□□□□□ -0.13
ATRXP46100 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.22□□□□□ -0.13
ATRXP46100 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATRXP46100 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.22□□□□□ -0.13
ATRXP46100 AL805961.1-203ENST00000641078 1258 ntBASIC14.22□□□□□ -0.13
ATRXP46100 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ATRXP46100 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATRXP46100 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.22□□□□□ -0.13
ATRXP46100 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ATRXP46100 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms