Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
APOBEC1P41238 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.28□□□□□ -0.12
APOBEC1P41238 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 AC127383.1-201ENST00000444697 1800 ntBASIC14.28□□□□□ -0.12
APOBEC1P41238 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.28□□□□□ -0.12
APOBEC1P41238 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.28□□□□□ -0.12
APOBEC1P41238 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.28□□□□□ -0.12
APOBEC1P41238 AC092127.1-201ENST00000567093 3455 ntBASIC14.28□□□□□ -0.12
APOBEC1P41238 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
APOBEC1P41238 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.28□□□□□ -0.12
APOBEC1P41238 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.28□□□□□ -0.12
APOBEC1P41238 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBEC1P41238 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 AC132872.4-202ENST00000622924 2756 ntBASIC14.28□□□□□ -0.12
APOBEC1P41238 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.28□□□□□ -0.12
APOBEC1P41238 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.28□□□□□ -0.12
APOBEC1P41238 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.27□□□□□ -0.12
APOBEC1P41238 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.27□□□□□ -0.12
APOBEC1P41238 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 BTBD7P1-201ENST00000447253 1453 ntBASIC14.27□□□□□ -0.12
APOBEC1P41238 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
APOBEC1P41238 AC092850.2-201ENST00000623821 2697 ntBASIC14.27□□□□□ -0.12
APOBEC1P41238 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBEC1P41238 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.27□□□□□ -0.13
APOBEC1P41238 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 BASP1P1-201ENST00000430708 665 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 AL512638.1-201ENST00000457493 794 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.27□□□□□ -0.13
APOBEC1P41238 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 SLED1-202ENST00000512051 380 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.27□□□□□ -0.13
APOBEC1P41238 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.27□□□□□ -0.13
APOBEC1P41238 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.27□□□□□ -0.13
APOBEC1P41238 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.27□□□□□ -0.13
APOBEC1P41238 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 AL844908.2-201ENST00000609461 460 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 AL390754.1-201ENST00000619088 582 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 AC087481.3-201ENST00000602886 1894 ntBASIC14.27□□□□□ -0.13
APOBEC1P41238 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
APOBEC1P41238 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.27□□□□□ -0.13
APOBEC1P41238 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBEC1P41238 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
APOBEC1P41238 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.26□□□□□ -0.13
APOBEC1P41238 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
APOBEC1P41238 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBEC1P41238 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms