Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC123567.1-201ENST00000548294 1261 ntBASIC14.51□□□□□ -0.09
RFC3P40938 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RFC3P40938 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
RFC3P40938 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RFC3P40938 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.51□□□□□ -0.09
RFC3P40938 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.51□□□□□ -0.09
RFC3P40938 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RFC3P40938 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
RFC3P40938 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CU639417.3-201ENST00000624240 1404 ntBASIC14.5□□□□□ -0.09
RFC3P40938 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RFC3P40938 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 AC022188.1-201ENST00000620960 1664 ntBASIC14.5□□□□□ -0.09
RFC3P40938 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.5□□□□□ -0.09
RFC3P40938 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
RFC3P40938 AC098850.1-201ENST00000419919 790 ntBASIC14.5□□□□□ -0.09
RFC3P40938 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CR383656.12-201ENST00000549567 513 ntBASIC14.5□□□□□ -0.09
RFC3P40938 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.5□□□□□ -0.09
RFC3P40938 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 AC132938.2-201ENST00000579188 680 ntBASIC14.5□□□□□ -0.09
RFC3P40938 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
RFC3P40938 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RFC3P40938 AL591163.1-201ENST00000641757 987 ntBASIC14.5□□□□□ -0.09
RFC3P40938 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RFC3P40938 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.5□□□□□ -0.09
RFC3P40938 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 AC105917.1-201ENST00000506637 2539 ntBASIC14.5□□□□□ -0.09
RFC3P40938 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.5□□□□□ -0.09
RFC3P40938 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RFC3P40938 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFC3P40938 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFC3P40938 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.49□□□□□ -0.09
RFC3P40938 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.49□□□□□ -0.09
RFC3P40938 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.49□□□□□ -0.09
RFC3P40938 AC245100.5-201ENST00000452108 331 ntBASIC14.49□□□□□ -0.09
RFC3P40938 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.49□□□□□ -0.09
RFC3P40938 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.49□□□□□ -0.09
RFC3P40938 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.49□□□□□ -0.09
RFC3P40938 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.49□□□□□ -0.09
RFC3P40938 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms