Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 AC073389.1-201ENST00000595595 795 ntBASIC15.11■□□□□ 0.01
KRT20P35900 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 AL691403.2-201ENST00000618460 490 ntBASIC15.11■□□□□ 0.01
KRT20P35900 AC055717.3-201ENST00000622967 595 ntBASIC15.11■□□□□ 0.01
KRT20P35900 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
KRT20P35900 AC134684.3-201ENST00000641758 218 ntBASIC15.11■□□□□ 0.01
KRT20P35900 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
KRT20P35900 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
KRT20P35900 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
KRT20P35900 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 RPS8P6-201ENST00000426177 609 ntBASIC15.1■□□□□ 0.01
KRT20P35900 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT20P35900 AC098859.1-201ENST00000502915 1238 ntBASIC15.1■□□□□ 0.01
KRT20P35900 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT20P35900 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 AL138918.1-201ENST00000568306 659 ntBASIC15.1■□□□□ 0.01
KRT20P35900 AC024267.1-201ENST00000582320 895 ntBASIC15.1■□□□□ 0.01
KRT20P35900 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.1■□□□□ 0.01
KRT20P35900 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.1■□□□□ 0.01
KRT20P35900 SPTSSB-204ENST00000617024 1292 ntBASIC15.1■□□□□ 0.01
KRT20P35900 AL513210.1-201ENST00000629608 234 ntBASIC15.1■□□□□ 0.01
KRT20P35900 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT20P35900 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT20P35900 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
KRT20P35900 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT20P35900 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT20P35900 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 CNN2P11-201ENST00000429351 262 ntBASIC15.09■□□□□ 0.01
KRT20P35900 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT20P35900 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT20P35900 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms