Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL3L1P16619 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL3L1P16619 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3L1P16619 AC136604.1-201ENST00000418535 575 ntBASIC13.04□□□□□ -0.32
CCL3L1P16619 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3L1P16619 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL3L1P16619 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3L1P16619 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3L1P16619 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.04□□□□□ -0.32
CCL3L1P16619 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 AL355385.1-201ENST00000606123 409 ntBASIC13.04□□□□□ -0.32
CCL3L1P16619 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.04□□□□□ -0.32
CCL3L1P16619 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 AC105917.1-201ENST00000506637 2539 ntBASIC13.04□□□□□ -0.32
CCL3L1P16619 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.04□□□□□ -0.32
CCL3L1P16619 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CCL3L1P16619 PKD1P5-201ENST00000532415 10291 ntBASIC13.04□□□□□ -0.32
CCL3L1P16619 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC022144.1-201ENST00000602255 1580 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC074338.1-201ENST00000416825 156 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 AC009477.1-201ENST00000452936 217 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 INGX-202ENST00000489074 768 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL3L1P16619 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC009407.1-201ENST00000568958 598 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.03□□□□□ -0.32
CCL3L1P16619 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CCL3L1P16619 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.03□□□□□ -0.32
CCL3L1P16619 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.03□□□□□ -0.32
CCL3L1P16619 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CCL3L1P16619 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CCL3L1P16619 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms