Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ATP2A2P16615 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.49■□□□□ 0.39
ATP2A2P16615 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP2A2P16615 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A2P16615 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP2A2P16615 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP2A2P16615 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A2P16615 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP2A2P16615 FAM21FP-201ENST00000426241 1131 ntBASIC17.48■□□□□ 0.39
ATP2A2P16615 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 AL162726.2-201ENST00000438986 1017 ntBASIC17.48■□□□□ 0.39
ATP2A2P16615 CSF2RBP1-201ENST00000447905 391 ntBASIC17.48■□□□□ 0.39
ATP2A2P16615 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A2P16615 RN7SL399P-201ENST00000471648 279 ntBASIC17.48■□□□□ 0.39
ATP2A2P16615 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A2P16615 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A2P16615 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.48■□□□□ 0.39
ATP2A2P16615 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ATP2A2P16615 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.48■□□□□ 0.39
ATP2A2P16615 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ATP2A2P16615 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ATP2A2P16615 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.48■□□□□ 0.39
ATP2A2P16615 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ATP2A2P16615 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ATP2A2P16615 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
ATP2A2P16615 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A2P16615 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A2P16615 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A2P16615 AC099548.2-209ENST00000480264 625 ntBASIC17.47■□□□□ 0.39
ATP2A2P16615 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.47■□□□□ 0.39
ATP2A2P16615 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 MIR5189-201ENST00000577370 114 ntBASIC17.47■□□□□ 0.39
ATP2A2P16615 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.47■□□□□ 0.39
ATP2A2P16615 CU634019.7-201ENST00000624153 1185 ntBASIC17.47■□□□□ 0.39
ATP2A2P16615 FP236241.2-201ENST00000624906 1185 ntBASIC17.47■□□□□ 0.39
ATP2A2P16615 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ATP2A2P16615 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A2P16615 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.47■□□□□ 0.39
ATP2A2P16615 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ATP2A2P16615 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ATP2A2P16615 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ATP2A2P16615 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms