Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 PCDH8P1-201ENST00000428983 2773 ntBASIC14.78□□□□□ -0.04
CCL4P13236 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 KRT18P25-201ENST00000508931 1278 ntBASIC14.78□□□□□ -0.04
CCL4P13236 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 AC078819.1-201ENST00000547454 765 ntBASIC14.78□□□□□ -0.04
CCL4P13236 AC012085.1-201ENST00000548270 765 ntBASIC14.78□□□□□ -0.04
CCL4P13236 AC023310.1-201ENST00000554836 735 ntBASIC14.78□□□□□ -0.04
CCL4P13236 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.78□□□□□ -0.04
CCL4P13236 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCL4P13236 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CCL4P13236 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCL4P13236 PCDHA12-202ENST00000613593 2588 ntBASIC14.78□□□□□ -0.04
CCL4P13236 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCL4P13236 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
CCL4P13236 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCL4P13236 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCL4P13236 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 MIR326-201ENST00000362220 95 ntBASIC14.77□□□□□ -0.05
CCL4P13236 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 MIR3615-201ENST00000581999 87 ntBASIC14.77□□□□□ -0.05
CCL4P13236 AC103810.3-201ENST00000583567 96 ntBASIC14.77□□□□□ -0.05
CCL4P13236 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL4P13236 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.77□□□□□ -0.05
CCL4P13236 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.77□□□□□ -0.05
CCL4P13236 AC138951.2-201ENST00000623455 1161 ntBASIC14.77□□□□□ -0.05
CCL4P13236 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CCL4P13236 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.05
CCL4P13236 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.76□□□□□ -0.05
CCL4P13236 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 AC006001.1-201ENST00000325130 474 ntBASIC14.76□□□□□ -0.05
CCL4P13236 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CCL4P13236 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.76□□□□□ -0.05
CCL4P13236 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.76□□□□□ -0.05
CCL4P13236 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms