Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AC023908.3-201ENST00000564211 3047 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.93□□□□□ -0.34
DEFA4P12838 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.93□□□□□ -0.34
DEFA4P12838 AC140658.5-201ENST00000438532 169 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 KRT19P2-202ENST00000557173 1012 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 AC034105.1-201ENST00000563488 319 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 AC120114.3-201ENST00000611923 658 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
DEFA4P12838 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
DEFA4P12838 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.93□□□□□ -0.34
DEFA4P12838 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.93□□□□□ -0.34
DEFA4P12838 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 AL592424.1-201ENST00000563624 1536 ntBASIC12.93□□□□□ -0.34
DEFA4P12838 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA4P12838 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
DEFA4P12838 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.92□□□□□ -0.34
DEFA4P12838 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 MED15P5-201ENST00000423150 992 ntBASIC12.92□□□□□ -0.34
DEFA4P12838 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 AL591424.1-201ENST00000442569 1213 ntBASIC12.92□□□□□ -0.34
DEFA4P12838 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.92□□□□□ -0.34
DEFA4P12838 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.92□□□□□ -0.34
DEFA4P12838 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.92□□□□□ -0.34
DEFA4P12838 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.92□□□□□ -0.34
DEFA4P12838 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.92□□□□□ -0.34
DEFA4P12838 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
DEFA4P12838 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.91□□□□□ -0.34
DEFA4P12838 AC006486.2-201ENST00000624246 2199 ntBASIC12.91□□□□□ -0.34
DEFA4P12838 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DEFA4P12838 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.91□□□□□ -0.34
DEFA4P12838 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms