Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARP1P09874 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.3■□□□□ 0.52
PARP1P09874 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PARP1P09874 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PARP1P09874 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARP1P09874 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARP1P09874 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PARP1P09874 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PARP1P09874 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PARP1P09874 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PARP1P09874 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.29■□□□□ 0.52
PARP1P09874 CLK3P2-201ENST00000427566 1453 ntBASIC18.29■□□□□ 0.52
PARP1P09874 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 RN7SL399P-201ENST00000471648 279 ntBASIC18.29■□□□□ 0.52
PARP1P09874 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.29■□□□□ 0.52
PARP1P09874 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.29■□□□□ 0.52
PARP1P09874 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
PARP1P09874 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.29■□□□□ 0.52
PARP1P09874 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.29■□□□□ 0.52
PARP1P09874 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PARP1P09874 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.29■□□□□ 0.52
PARP1P09874 PRAL-201ENST00000624952 3286 ntBASIC18.29■□□□□ 0.52
PARP1P09874 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.29■□□□□ 0.52
PARP1P09874 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.29■□□□□ 0.52
PARP1P09874 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.29■□□□□ 0.52
PARP1P09874 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PARP1P09874 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PARP1P09874 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PARP1P09874 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.28■□□□□ 0.52
PARP1P09874 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.28■□□□□ 0.52
PARP1P09874 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.28■□□□□ 0.52
PARP1P09874 AP005117.1-202ENST00000581724 1908 ntBASIC18.28■□□□□ 0.52
PARP1P09874 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PARP1P09874 MYCLP2-201ENST00000449268 967 ntBASIC18.28■□□□□ 0.52
PARP1P09874 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.28■□□□□ 0.52
PARP1P09874 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.28■□□□□ 0.52
PARP1P09874 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.28■□□□□ 0.52
PARP1P09874 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.28■□□□□ 0.52
PARP1P09874 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.28■□□□□ 0.52
PARP1P09874 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARP1P09874 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.27■□□□□ 0.52
PARP1P09874 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.27■□□□□ 0.52
PARP1P09874 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.27■□□□□ 0.52
PARP1P09874 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PARP1P09874 DGCR5-201ENST00000399539 862 ntBASIC18.27■□□□□ 0.52
PARP1P09874 AC098850.1-201ENST00000419919 790 ntBASIC18.27■□□□□ 0.52
PARP1P09874 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.27■□□□□ 0.52
PARP1P09874 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 RN7SL692P-201ENST00000464677 288 ntBASIC18.27■□□□□ 0.52
PARP1P09874 AC104596.2-201ENST00000512793 793 ntBASIC18.27■□□□□ 0.52
PARP1P09874 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
PARP1P09874 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.27■□□□□ 0.52
PARP1P09874 WASH4P-201ENST00000564273 1246 ntBASIC18.27■□□□□ 0.52
PARP1P09874 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.27■□□□□ 0.52
PARP1P09874 MIR8072-201ENST00000614241 80 ntBASIC18.27■□□□□ 0.52
PARP1P09874 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARP1P09874 AL358472.5-202ENST00000641448 1267 ntBASIC18.27■□□□□ 0.52
PARP1P09874 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms