Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSBP07858 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.88□□□□□ -0.03
CTSBP07858 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSBP07858 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSBP07858 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CTSBP07858 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CTSBP07858 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.88□□□□□ -0.03
CTSBP07858 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CTSBP07858 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CTSBP07858 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.88□□□□□ -0.03
CTSBP07858 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 AC127383.1-201ENST00000444697 1800 ntBASIC14.87□□□□□ -0.03
CTSBP07858 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CTSBP07858 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CTSBP07858 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.87□□□□□ -0.03
CTSBP07858 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.87□□□□□ -0.03
CTSBP07858 AC015910.1-201ENST00000579400 975 ntBASIC14.87□□□□□ -0.03
CTSBP07858 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.87□□□□□ -0.03
CTSBP07858 AC010319.3-201ENST00000597028 470 ntBASIC14.87□□□□□ -0.03
CTSBP07858 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.87□□□□□ -0.03
CTSBP07858 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CTSBP07858 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 GK-202ENST00000378941 458 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSBP07858 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSBP07858 AL442647.2-201ENST00000429864 857 ntBASIC14.86□□□□□ -0.03
CTSBP07858 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 TTTY23B-201ENST00000442790 549 ntBASIC14.86□□□□□ -0.03
CTSBP07858 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.86□□□□□ -0.03
CTSBP07858 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.86□□□□□ -0.03
CTSBP07858 HILS1-202ENST00000545329 423 ntBASIC14.86□□□□□ -0.03
CTSBP07858 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CTSBP07858 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.86□□□□□ -0.03
CTSBP07858 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.86□□□□□ -0.03
CTSBP07858 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CTSBP07858 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.86□□□□□ -0.03
CTSBP07858 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms