Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 LAGE3P1-201ENST00000425356 484 ntBASIC13.45□□□□□ -0.26
CD3DP04234 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.45□□□□□ -0.26
CD3DP04234 FGFR3P6-201ENST00000457012 610 ntBASIC13.45□□□□□ -0.26
CD3DP04234 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.45□□□□□ -0.26
CD3DP04234 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 MIR4313-201ENST00000580760 101 ntBASIC13.45□□□□□ -0.26
CD3DP04234 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CD3DP04234 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.45□□□□□ -0.26
CD3DP04234 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CD3DP04234 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 IER3-202ENST00000376377 1350 ntBASIC13.45□□□□□ -0.26
CD3DP04234 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.45□□□□□ -0.26
CD3DP04234 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD3DP04234 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD3DP04234 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.44□□□□□ -0.26
CD3DP04234 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 GPX1P2-201ENST00000429271 606 ntBASIC13.44□□□□□ -0.26
CD3DP04234 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.44□□□□□ -0.26
CD3DP04234 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 AC008667.4-201ENST00000607370 168 ntBASIC13.44□□□□□ -0.26
CD3DP04234 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.44□□□□□ -0.26
CD3DP04234 ACTL9-202ENST00000612068 1252 ntBASIC13.44□□□□□ -0.26
CD3DP04234 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.44□□□□□ -0.26
CD3DP04234 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CD3DP04234 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CD3DP04234 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD3DP04234 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms