Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PDGFAP04085 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 KRT223P-202ENST00000449164 1292 ntBASIC14.84□□□□□ -0.03
PDGFAP04085 AC007389.4-201ENST00000454674 793 ntBASIC14.84□□□□□ -0.03
PDGFAP04085 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.84□□□□□ -0.03
PDGFAP04085 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PDGFAP04085 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PDGFAP04085 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.84□□□□□ -0.03
PDGFAP04085 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PDGFAP04085 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFAP04085 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDGFAP04085 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFAP04085 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFAP04085 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PDGFAP04085 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFAP04085 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
PDGFAP04085 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFAP04085 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PDGFAP04085 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.83□□□□□ -0.03
PDGFAP04085 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFAP04085 AL645728.1-201ENST00000366221 2101 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 AC126177.1-201ENST00000547829 2218 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PDGFAP04085 FAM86MP-201ENST00000340703 885 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 BNIP3P42-201ENST00000454982 569 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.83□□□□□ -0.04
PDGFAP04085 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 AC092337.1-201ENST00000568699 1129 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 BNIP3P29-201ENST00000598302 571 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 AC011447.5-201ENST00000616168 564 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PDGFAP04085 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 FAM45BP-202ENST00000592932 1624 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PDGFAP04085 AC063926.3-201ENST00000624734 5658 ntBASIC14.83□□□□□ -0.04
PDGFAP04085 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFAP04085 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFAP04085 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms