Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 ELK2AP-201ENST00000392510 1007 ntBASIC17.34■□□□□ 0.37
CD4P01730 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CD4P01730 CALR4P-201ENST00000431943 946 ntBASIC17.34■□□□□ 0.37
CD4P01730 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.34■□□□□ 0.37
CD4P01730 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.34■□□□□ 0.37
CD4P01730 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.34■□□□□ 0.37
CD4P01730 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 KRT18P43-201ENST00000469825 1281 ntBASIC17.34■□□□□ 0.37
CD4P01730 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.34■□□□□ 0.37
CD4P01730 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 RNA5SP423-201ENST00000517127 109 ntBASIC17.34■□□□□ 0.37
CD4P01730 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 AP001258.2-201ENST00000529891 490 ntBASIC17.34■□□□□ 0.37
CD4P01730 AP001282.1-201ENST00000531301 1499 ntBASIC17.34■□□□□ 0.37
CD4P01730 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.34■□□□□ 0.37
CD4P01730 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 AL450472.2-201ENST00000603663 1156 ntBASIC17.34■□□□□ 0.37
CD4P01730 AC093813.1-201ENST00000605066 256 ntBASIC17.34■□□□□ 0.37
CD4P01730 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.34■□□□□ 0.37
CD4P01730 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD4P01730 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD4P01730 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.33■□□□□ 0.37
CD4P01730 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD4P01730 REXO1L1P-202ENST00000608646 1974 ntBASIC17.33■□□□□ 0.37
CD4P01730 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CD4P01730 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD4P01730 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD4P01730 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD4P01730 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.33■□□□□ 0.37
CD4P01730 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.33■□□□□ 0.36
CD4P01730 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.33■□□□□ 0.36
CD4P01730 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.33■□□□□ 0.36
CD4P01730 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.33■□□□□ 0.36
CD4P01730 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.33■□□□□ 0.36
CD4P01730 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.33■□□□□ 0.36
CD4P01730 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CD4P01730 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.33■□□□□ 0.36
CD4P01730 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.33■□□□□ 0.36
CD4P01730 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD4P01730 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD4P01730 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.32■□□□□ 0.36
CD4P01730 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.32■□□□□ 0.36
CD4P01730 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.32■□□□□ 0.36
CD4P01730 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.32■□□□□ 0.36
CD4P01730 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD4P01730 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD4P01730 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms